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application/pdf Tech Note: New RNA-seq Bioinformatics Best Practice

In April 2017 NGI Stockholm is moving to a brand new RNA-seq best-practice analysis pipeline, rebuilt from the ground up. This tech note describes why we're doing this and what is changing.

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2017-04-06T10:35:54.525Z

application/pdf Custom amplicon sequencing on Illumina

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2017-03-31T11:44:57.101Z

application/pdf Comparison of PE and SE for RNA-seq

In this tech note, we look into the difference between the two types of sequencing, and how the cost of library preparations and sequencing affect project planning.

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2017-03-09T14:23:39.210Z

application/pdf Xenograft technote

In this tech note, we discuss the results of an in-silico simulation of the two sequencing types in an effort to predict how important the longer reads will be for the Xenograft study.

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2017-03-09T14:22:23.720Z

application/pdf Price examples for NGI Stockholm (Swedish academia)

NGI Sweden Stockholm node: Price examples for NGI Stockholm (Swedish academia), document 1379-9, 2017-03-09.

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2017-03-09T10:16:32.722Z

application/pdf Sample requirements for genomics, Stockholm

NGI Sweden Stockholm node: Sample requirements for genomics projects, document 1373-13, 2017-03-09

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2017-03-09T10:14:43.341Z

application/pdf NGI Publication list 2016

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2017-02-28T18:23:13.118Z

application/octetstream NGI Seminar Series: Epigenetics - Introduction to NG and genotyping techniques

Introduction to NGS and genotyping techniques for epigenetical studies. Presented by Jessica Nordlund, Head of R&D at the SNP&SEQ Technology platform at the NGI Seminar Series - Epigenetics on October 27, 2016.

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2016-11-02T13:50:23.681Z

application/pdf SciLifeLab Best practices in de novo genome assembly (v1.2)

A description of current best practice for de novo genome assembly by NGI Sweden and NBIS (National Bioinformatics Infrastructure Sweden).

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2016-05-20T12:29:58.861Z

application/pdf Sample preparation for Ion Torrent and Ion Proton (Jan 2015)

Instructions for sample preparation for the Ion Torrent and Ion Proton instruments at the NGI Sweden node in Uppsala, Dept. Immun., Gen. & Path.

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2016-04-29T11:12:55.751Z

application/pdf Sample preparation for PacBio RSII (Nov 2014)

Instructions for sample preparation for PacBio RSII instrument at the NGI Sweden node in Uppsala, Dept. Immun., Gen. & Path.

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2016-04-22T11:59:24.457Z