News » Author: Yanara Marincevic-Zuniga

Price updates for Illumina EPIC array at NGI

22nd January 2021  -  Categories: Updates

NGI in collaboration with Illumina are happy to announce a >30% price reduction for methylation profiling using the Illumina EPIC array in large-cohorts of ≥500 samples. For further information please contact: contact@genotyping.se

Data & Methodology Publication – Sarek: A portable workflow for whole-genome sequencing analysis of germline and somatic variants

4th September 2020  -  Categories: Research & Development

Sarek: an open-source bioinformatic tool to detect germline variants and somatic mutations based on sequencing data from WGS, whole-exome sequencing (WES), or gene panels. Sarek offers easy, efficient, and reproducible analyses, and can readily be used both as a production workflow at sequencing facilities and as a powerful stand-alone tool for individual research groups.

Data & Methodology Publication – The nf-core framework for community-curated bioinformatics pipelines

13th February 2020  -  Categories: Research & Development

Presenting a framework for high-quality bioinformatics pipelines that can be used across all institutions and research facilities.

Data & Methodology Publication – SweGen: a whole-genome data resource of genetic variability in a cross-section of the Swedish population

23rd August 2017  -  Categories: Research & Development

SweGen: generating a comprehensive data resource for population-based genetic variants that describes the landscape of genetic variation in the Swedish population

Data & Methodology Publication – Cluster Flow: A user-friendly bioinformatics workflow tool

2nd May 2017  -  Categories: Research & Development

Cluster Flow: a simple and flexible bioinformatics pipeline tool designed for quick and user-friendly installation, offers next-generation sequencing data analysis with pre-configured modules and pipelines for common bioinformatics tasks.

Data & Methodology Publication – SPlinted Ligation Adapter Tagging (SPLAT), a novel library preparation method for whole genome bisulphite sequencing

7th April 2017  -  Categories: Research & Development

Presenting a novel approach for quick and cost effective WGBS library preparation that is based on splinted adaptor tagging (SPLAT) of bisulphite-converted single-stranded DNA.

Data & Methodology Publication – MultiQC: summarize analysis results for multiple tools and samples in a single report

19th October 2016  -  Categories: Research & Development

MultiQC: a bioinformatics tool that automates the parsing of NGS metadata, creating a single summary report with powerful visualizations and a simple interface. MultiQC enables researchers to quickly identify global trends and biases, improving quality control processes and reducing the risk of batch effects in large-scale sequencing studies.