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Spatial

Methods to add spatial information to sequencing data

We offer spatially resolved RNA-seq analysis through the 10X Genomics Visium spatial gene expression assay, providing positional context of RNA-seq data in microdissected tissue sections. If you are interested in this technology, please read more in the links below or contact us for more information.

Applications 1 Methods 5 Bioinformatics 1
Spatial transcriptomics
Quantification of transcription within the spatial context of intact tissue.
Visium CytAssist for FFPE samples (probe based)

We now offer spatially resolved transcriptomics through the 10X Genomics Visium CytAssist, which combines histology with probe-based transcriptomics in a spatial context.

Visium CytAssist for Fresh Frozen and Fixed Frozen samples (probe based)

We now offer spatially resolved transcriptomics through the 10X Genomics Visium CytAssist, which combines histology with probe-based transcriptomics in a spatial context.

Visium for Fresh Frozen samples (poly-A based)

We offer spatial transcriptomics through the 10X Genomics Visium method. The method combines histology with unbiased transcriptomics in a spatial context.

Visium HD CytAssist for FF and FxF samples (probe based)

We now offer high resolution spatially resolved transcriptomics through the 10X Genomics Visium HD CytAssist, which combines histology with probe-based transcriptomics in HD spatial context

Visium HD CytAssist for FFPE samples (probe based)

We now offer high resolution spatially resolved transcriptomics through the 10X Genomics Visium HD CytAssist, which combines histology with probe-based transcriptomics in HD spatial context

Spatial Transcriptomics analysis

Demultiplexing, image alignment, read alignment and barcode/UMI counting of sequencing reads generated by the 10X Genomics Visium assay.