High-throughput full-genome or targeted sequencing of DNA from organisms with an existing reference genome.
Sequencing of the 16S gene to study bacterial diversity and composition in a sample.
targeted library preparation illumina 16S ampliconSequencing of PCR amplicons to study genetic variation within small target regions.
16S amplicon targeted library preparation illuminaLow cost library preparation option for gDNA based on bead-linked transposase. Only for full plates of samples.
WGS dna nextera normalization library preparation genome illuminaMethod for shotgun DNA libraries used for whole genome sequencing and metagenomics.
WGS dna tagmentation PCR-free library preparation genome illuminaGold standard method for shotgun DNA libraries used for whole genome sequencing and metagenomics.
library preparation truseq genome illumina WGS dnaLibrary preparation from limited input DNA, used in whole genome sequencing and metagenomics etc.
WGS dna library preparation truseq genome illuminaLibrary preparation for DNA, ideal for preparing libraries from small amounts of input material. Works well for shotgun libraries, ChIP DNA and FFPE samples, amongst others.
library preparation genome illumina WGS dnaIon Torrent semiconductor sequencing technology is as simple as it is fast.
s5 amplicon ampliseq ion torrentNanopore instruments can sequence very long continuous fragments of DNA. Sequencing native DNA allows detection of base modifications.
long-read nanopore assemblyPacBio SMRT sequencing generates reads tens of kilobases in length enabling high quality genome assembly, structural variant analysis, amplicon resequencing, full-length transcript isoform sequencing, full-length 16S rRNA sequencing and amplification free epigenetic characterization.
clr de novo iso seq sv revio smrt assembly pacbio methylation amplicon sequel hifiGenotyping-by-sequencing without prior genome information.
genome illumina wholegenome dna polymorphism library preparationA platform for human whole exome sequencing (WES) using target enrichment and library preparation for next generation sequencing.
library preparation illumina dna exome targetedIon Torrent data handling and analysis
ampliseq Torrent Suite Ion ReporterQuality control, Basecalling and multiplexing of sequencing reads generated by Oxford Nanopore sequencers.
long-read nanoporeAdditional compute intensive nanopore raw data processing services provided by NGI
base modifications basecalling fast5 methylationBasic quality-control monitoring of Illumina FastQ sequence data.
QC fastqc fastq screen checkqcRuns with illumina DNA-sequencing data, WGS or targeted sequencing e.g. WES. Aligns to the reference genome, gives QC metrics, does variant-calling and finishes with annotation.
WGS sarek cancer human data WES