High-throughput full-genome or targeted sequencing of DNA from organisms with an existing reference genome.
Sequencing of the 16S gene to study bacterial diversity and composition in a sample.
library preparation illumina 16S amplicon targetedSequencing of PCR amplicons to study genetic variation within small target regions.
library preparation illumina 16S amplicon targetedLow cost library preparation option for gDNA based on bead-linked transposase. Only for full plates of samples.
normalization library preparation genome illumina WGS dna nexteraMethod for shotgun DNA libraries used for whole genome sequencing and metagenomics.
library preparation genome illumina WGS dna tagmentation PCR-freeGold standard method for shotgun DNA libraries used for whole genome sequencing and metagenomics.
genome illumina WGS dna library preparation truseqLibrary preparation from limited input DNA, used in whole genome sequencing and metagenomics etc.
library preparation truseq genome illumina WGS dnaLibrary preparation for DNA, ideal for preparing libraries from small amounts of input material. Works well for shotgun libraries, ChIP DNA and FFPE samples, amongst others.
genome illumina WGS dna library preparationIon Torrent semiconductor sequencing technology is as simple as it is fast.
ion torrent s5 amplicon ampliseqNanopore instruments can sequence very long continuous fragments of DNA. Sequencing native DNA allows detection of base modifications.
assembly long-read nanoporePacBio SMRT sequencing generates reads tens of kilobases in length enabling high quality genome assembly, structural variant analysis, amplicon resequencing, full-length transcript isoform sequencing, full-length 16S rRNA sequencing and amplification free epigenetic characterization.
iso seq sv smrt assembly pacbio methylation amplicon sequel hifi clr de novoGenotyping-by-sequencing without prior genome information.
dna polymorphism library preparation genome illumina wholegenomeA platform for human whole exome sequencing (WES) using target enrichment and library preparation for next generation sequencing.
illumina dna exome targeted library preparationIon Torrent data handling and analysis
ampliseq Torrent Suite Ion ReporterQuality control, Basecalling and multiplexing of sequencing reads generated by Oxford Nanopore sequencers.
long-read nanoporeAnalysis applications provided by NGI using PacBio’s open-source SMRT Analysis software suite.
resequencing base modifications pacbio assembly iso-seq structural variation ccs hifiAdditional compute intensive nanopore raw data processing services provided by NGI
fast5 methylation base modifications basecallingBasic quality-control monitoring of Illumina FastQ sequence data.
QC fastqc fastq screen checkqcRuns with illumina DNA-sequencing data, WGS or targeted sequencing. Aligns to the reference genome, gives QC metrics, does variant-calling and finishes with annotation.
sarek cancer human data WGS