NGI during Covid-19 outbreak

NGI is still up and running during the Covid-19 pandemic, but we are experiencing some limitations in terms of personnel and key reagents. Each NGI node is following its respective host university recommendations and will continue operation until further notice.

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Associated Keywords: illumina

Illumina TruSeq Stranded mRNA

RNA sequencing of mRNAs selected through poly-A enrichment.

Illumina TruSeq Stranded total RNA (RiboZero)

RNA sequencing of all RNA in a sample after depletion of rRNA or another type of highly abundant RNA.

Illumina TruSeq Stranded RNA without selection or depletion

RNA sequencing of either all RNAs in a sample, or of a RNA sample depleted of for example rRNA by the user.

10X Genomics Visium

We offer spatial transcriptomics through the 10X Genomics Visium method. The method combines histology with unbiased transcriptomics in a spatial context.

Arima HiC

Production of high-quality proximity ligation libraries, using two restriction enzymes.

ATAC-seq

A method to identify open chromatin regions, such as promotor areas, using a transposase.

Chromium Single Cell V(D)J

Simultaneous analysis of gene expression and immunoprofiling of V(D)J clonotypes in the same single cell.