Associated Keywords: transcriptomics

Illumina TruSeq Stranded mRNA

RNA sequencing of mRNAs selected through poly-A enrichment.

Illumina Stranded total RNA Prep (Ribo-Zero Plus)

Total RNA sequencing based on reduced rRNA content and other type of highly abundant RNAs in both prokaryotic and eukaryotic samples.

AVITI24 – Teton

NGI offers multiomic spatial profiling through the AVITI24™ with Teton™ CytoProfiling, which combines high-resolution imaging with simultaneous RNA, protein, and morphology detection in a single run.

Visium HD 3´ – PolyA-based

NGI offers high resolution spatial transcriptomics through the 10x Genomics Visium HD 3’, which combines histology with PolyA-based transcriptomics in HD spatial context

Visium HD – Probe-based – FF/FxF samples

We now offer high resolution spatially resolved transcriptomics through the 10X Genomics Visium HD CytAssist, which combines histology with probe-based transcriptomics in HD spatial context

Visium HD – Probe-based – FFPE samples

We now offer high resolution spatially resolved transcriptomics through the 10X Genomics Visium HD CytAssist, which combines histology with probe-based transcriptomics in HD spatial context

RNA-seq analysis

Runs with illumina total RNA-sequencing data. Aligns to the reference genome, gives QC metrics and finishes with gene count matrices.

Spatial Transcriptomics analysis

Demultiplexing, image alignment, read alignment and barcode/UMI counting of sequencing reads generated by the 10X Genomics Visium assay.