Associated Keywords: RNA-Seq

Methods 7 Bioinformatics 1

Parse Evercode

single-cell parse combinatorial transcriptomics RNA mRNA illumina RNA-Seq

Illumina TruSeq Stranded mRNA

RNA sequencing of mRNAs selected through poly-A enrichment.

library preparation transcriptomics RNA truseq mRNA illumina RNA-Seq

Illumina TruSeq Stranded RNA without selection

RNA sequencing of either all RNAs in a sample, or of a RNA sample depleted of for example rRNA by the user.

library preparation RNA truseq illumina rnaseq RNA-Seq

Illumina Stranded total RNA Prep (Ribo-Zero Plus)

Total RNA sequencing based on reduced rRNA content and other type of highly abundant RNAs in both prokaryotic and eukaryotic samples.

RNA-Seq library preparation transcriptomics RNA mRNA illumina

10X Genomics Epi Multiome ATAC + Gene Expression

Profiling of 3´gene expression and chromatin accessibility in the same cell.

ATAC chromium library preparation 10x Genomics transcriptomics single cell RNA mRNA illumina ATAC-seq RNA-Seq

10X Genomics Universal 3’ /5’ Gene Expression (GEM-X or Next-GEM)

Profiling of gene expression levels at single-cell resolution.

RNA mRNA illumina RNA-Seq chromium 10x Genomics library preparation transcriptomics single cell

10X Chromium Flex Gene Expression (fixed RNA)

Single-cell profiling of gene expression levels on fixed cells.

chromium 10x Genomics fixed cells library preparation transcriptomics single cell RNA mRNA illumina RNA-Seq

RNA-seq analysis

Runs with illumina total RNA-sequencing data. Aligns to the reference genome, gives QC metrics and finishes with gene count matrices.

rnaseq RNA-Seq transcriptomics