Associated Keywords: RNA-Seq

Methods 7 Bioinformatics 1

Parse Evercode

parse combinatorial transcriptomics RNA mRNA illumina RNA-Seq single-cell

Illumina TruSeq Stranded mRNA

RNA sequencing of mRNAs selected through poly-A enrichment.

truseq mRNA illumina RNA-Seq library preparation transcriptomics RNA

Illumina TruSeq Stranded RNA without selection

RNA sequencing of either all RNAs in a sample, or of a RNA sample depleted of for example rRNA by the user.

illumina rnaseq RNA-Seq library preparation RNA truseq

Illumina Stranded total RNA Prep (Ribo-Zero Plus)

Total RNA sequencing based on reduced rRNA content and other type of highly abundant RNAs in both prokaryotic and eukaryotic samples.

library preparation transcriptomics RNA mRNA illumina RNA-Seq

10X Chromium Epi Multiome ATAC + Gene Expression

Profiling of 3´gene expression and chromatin accessibility in the same cell.

transcriptomics single cell RNA mRNA illumina ATAC-seq RNA-Seq ATAC chromium library preparation 10x Genomics

10X Chromium Universal 3’ /5’ Gene Expression (GEM-X or Next-GEM)

Profiling of gene expression levels at single-cell resolution.

illumina RNA-Seq chromium 10x Genomics library preparation transcriptomics single cell RNA mRNA

10X Chromium Flex Gene Expression (fixed RNA)

Single-cell profiling of gene expression levels on fixed cells.

library preparation transcriptomics single cell RNA mRNA illumina RNA-Seq chromium 10x Genomics fixed cells

RNA-seq analysis

Runs with illumina total RNA-sequencing data. Aligns to the reference genome, gives QC metrics and finishes with gene count matrices.

transcriptomics rnaseq RNA-Seq