Status: NGI Stockholm

This protocol is available at NGI Stockholm.

HLA Typing with Nanopore Sequencing

The complexity and polymorphic nature of the 4 Mb region makes it challenging to resolve using short-read sequencing technology. Nanopore (ONT) sequencing, can provide long reads that overcome these challenges, enabling the identification of variants that could represent new biomarkers, unambiguous haplotype phasing of single-nucleotide variants (SNVs), and the potential for increased accuracy of HLA typing at a higher resolution.

Smart-seq3

Profiling of gene expression levels at single-cell resolution.

Visium HD CytAssist for FFPE samples

We now offer high resolution spatially resolved transcriptomics through the 10X Genomics Visium HD CytAssist, which combines histology with probe-based transcriptomics in HD spatial context

Visium CytAssist for Fresh Frozen and Fixed Frozen samples

We now offer spatially resolved transcriptomics through the 10X Genomics Visium CytAssist, which combines histology with probe-based transcriptomics in a spatial context.

Visium CytAssist for FFPE samples

We now offer spatially resolved transcriptomics through the 10X Genomics Visium CytAssist, which combines histology with probe-based transcriptomics in a spatial context.

Visium for Fresh Frozen samples

We offer spatial transcriptomics through the 10X Genomics Visium method. The method combines histology with unbiased transcriptomics in a spatial context.

Omni-ATAC

A method to identify open chromatin regions, such as promotor areas, using a transposase.

Element Biosciences

A new player in the field of short-read sequencing.