This protocol is available at NGI Stockholm.
Multiple rounds of barcoding of fixed and permeabilised cells.
parse combinatorial transcriptomics RNA mRNA illumina RNA-Seq single-cellNGI offers multiomic spatial profiling through the AVITI24™ with Teton™ CytoProfiling, which combines high-resolution imaging with simultaneous RNA, protein, and morphology detection in a single run.
RNA illumina spatial transcriptomicsA new player in the field of short-read sequencing.
cloudbreak short-reads aviti element biosciencesAmpliseq is a bioinformatics analysis pipeline used for 16S rRNA amplicon sequencing data.
amplicon ampliseqBioinformatic analysis pipeline for ATAC-seq data
chromatin open chromatin ATACseq ATAC-seqPipeline for quality control of Restriction-site Associated DNA sequencing (RAD-Seq). Genotyping-by-sequencing without prior genome information.
rad-seqRuns with illumina small RNA-sequencing data. Aligns to the reference genome, gives QC metrics and finishes with gene count matrices.
smrnaseq small RNA smrna-seq